Basic Information
Locus ID:
BniB08g033480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 18704077 | 18705706 | - | BniB08g033480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 45,949.72 Da | 39.52 | 86.32 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 114 | 369 | 8.05781E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 97 | 364 | 1.5E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 377 | 7.01E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 171 | 2.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 172 | 390 | 4.2E-57 | - |
| SMART | SM00220 | serkin_6 | 96 | 370 | 9.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 96 | 370 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 102 | 124 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 418 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018476194.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Raphanus sativus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A078G9N7 | BnaC03g27440D protein OS=Brassica napus OX=3708 GN=BnaC03g27440D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology