Basic Information
Locus ID:
BniB08g033460.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 18680222 | 18684601 | - | BniB08g033460.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 100,280.00 Da | 36.03 | 89.80 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 608 | 863 | 2.98671E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 592 | 858 | 9.1E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 63 | 3.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 243 | 300 | 1.0E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 354 | 2.21E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 576 | 871 | 5.26E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 362 | 8.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 183 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 883 | 2.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 561 | 665 | 9.0E-35 | - |
| SMART | SM00220 | serkin_6 | 590 | 864 | 9.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 590 | 864 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 596 | 618 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 912 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_013628286.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Brassica oleracea var. oleracea] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WN13 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_002950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology