Basic Information
Locus ID:
BniB08g030220.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 15943720 | 15945512 | - | BniB08g030220.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 63,442.67 Da | 45.44 | 85.17 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 115 | 180 | 1.90235E-4 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 269 | 518 | 2.9E-52 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 40 | 107 | 5.1E-15 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 86 | 182 | 6.68E-14 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 568 | 2.65E-5 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 31 | 108 | 4.14E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 114 | 184 | 1.5E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 32 | 113 | 6.3E-14 | - |
| SMART | SM00213 | ubq_7 | 111 | 182 | 2.6 | IPR000626 |
| SMART | SM00213 | ubq_7 | 34 | 106 | 0.0097 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 113 | 186 | 10.22276 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 37 | 106 | 13.293092 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_013734870.1 | phosphatidylinositol 4-kinase gamma 4-like [Brassica napus] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8BEI9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003212 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology