Basic Information
Locus ID:
BniB08g030050.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 15838532 | 15840726 | + | BniB08g030050.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 61,378.67 Da | 51.73 | 74.06 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 139 | 217 | 8.209E-16 | - |
| Pfam | PF00651 | BTB/POZ domain | 136 | 231 | 8.3E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 257 | 349 | 2.7E-9 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 433 | 545 | 2.16E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 135 | 231 | 1.49E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 265 | 372 | 6.4E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 128 | 253 | 6.0E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 136 | 234 | 5.2E-10 | IPR000210 |
| SMART | SM00875 | BACK_2 | 249 | 351 | 3.8E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 134 | 203 | 13.963395 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_013725852.1 | BTB/POZ domain-containing protein At2g46260 [Brassica napus] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WPW2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003233 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology