Basic Information
Locus ID:
BniB08g029990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 15820399 | 15821121 | - | BniB08g029990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 8,501.66 Da | 50.67 | 91.05 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 75 | 4.6E-8 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 76 | 1.8E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko01522 (Endocrine resistance)
map01522 (Endocrine resistance)
ko01524 (Platinum drug resistance)
map01524 (Platinum drug resistance)
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04013 (MAPK signaling pathway - fly)
map04013 (MAPK signaling pathway - fly)
ko04014 (Ras signaling pathway)
map04014 (Ras signaling pathway)
ko04015 (Rap1 signaling pathway)
map04015 (Rap1 signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04210 (Apoptosis)
ko04214 (Apoptosis - fly)
map04214 (Apoptosis - fly)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04320 (Dorso-ventral axis formation)
map04320 (Dorso-ventral axis formation)
ko04350 (TGF-beta signaling pathway)
map04350 (TGF-beta signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04611 (Platelet activation)
map04620 (Toll-like receptor signaling pathway)
map04621 (NOD-like receptor signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04657 (IL-17 signaling pathway)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
map04664 (Fc epsilon RI signaling pathway)
map04666 (Fc gamma R-mediated phagocytosis)
map04668 (TNF signaling pathway)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46070.2 | mitogen-activated protein kinase 12. Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants. | 0 |
| RefSeq | XP_002882049.1 | mitogen-activated protein kinase 12 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q8GYQ5 | Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=MPK12 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7G2EEE6 | (thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS9579 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31261 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah039203 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026019 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G002620 |
| Brassicaceae | Brassica nigra | 1 | BniB08g029990.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g09920 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9511 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb0G37187 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-34746, nbis-gene-36165 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7144 |
| Salicaceae | Populus euphratica | 1 | populus_peu31636 |