Basic Information
Locus ID:
BniB08g028630.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
MPK6
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 15091451 | 15093570 | + | BniB08g028630.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 44,774.67 Da | 50.04 | 91.07 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07858 | STKc_TEY_MAPK | 52 | 387 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 64 | 344 | 3.6E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 352 | 3.24E-98 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 42 | 381 | 3.4E-165 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 371 | 3.4E-165 | - |
| SMART | SM00220 | serkin_6 | 59 | 344 | 4.2E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 344 | 45.389233 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| ProSitePatterns | PS01351 | MAP kinase signature. | 94 | 197 | - | IPR003527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43790.1 | MAP kinase 6. Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. | 0 |
| RefSeq | XP_009133635.2 | mitogen-activated protein kinase 6 [Brassica rapa] | 0 |
| Q39026 | Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=MPK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WMJ3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology