Basic Information
Locus ID:
BniB08g027610.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 14448652 | 14450072 | - | BniB08g027610.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 29,630.87 Da | 44.15 | 82.71 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 13 | 235 | 2.1E-102 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 6 | 237 | 3.79E-101 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 248 | 3.2E-125 | IPR036815 |
| SMART | SM00101 | 1433_4 | 7 | 248 | 5.7E-161 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 1 | 248 | 2.6E-115 | IPR000308 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 45 | 55 | - | IPR023409 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 217 | 236 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 119 | 141 | 1.8E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 181 | 207 | 1.8E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 39 | 68 | 1.8E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 208 | 237 | 1.8E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 154 | 180 | 1.8E-82 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 88 | 112 | 1.8E-82 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 262 | - | - |
| Coils | Coil | Coil | 13 | 33 | - | - |
| Coils | Coil | Coil | 195 | 215 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42590.2 | general regulatory factor 9. 14-3-3 gene. Binds calcium and displays induced structural changes. | 0 |
| RefSeq | XP_009133546.1 | 14-3-3-like protein GF14 mu isoform X2 [Brassica rapa] | 0 |
| Q96299 | 14-3-3-like protein GF14 mu OS=Arabidopsis thaliana OX=3702 GN=GRF9 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WQA0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003458 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology