HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: BniB08g027490.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: amine oxidase
Maps and Mapping Data
Chromosome Start End Strand ID
B8 14387964 14392182 - BniB08g027490.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.66 51,451.53 Da 35.50 96.30 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 261 352 2.95931E-13 IPR002083
CDD cd00121 MATH 5 126 9.82759E-32 IPR002083
Pfam PF00917 MATH domain 11 127 2.1E-15 IPR002083
Pfam PF00917 MATH domain 280 362 1.0E-5 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 3 130 4.74E-32 -
SUPERFAMILY SSF49599 TRAF domain-like 280 367 5.89E-16 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 266 377 2.5E-16 IPR008974
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 139 6.0E-35 IPR008974
SMART SM00061 math_3 4 108 1.1E-16 IPR002083
SMART SM00061 math_3 224 344 0.37 IPR002083
ProSiteProfiles PS50144 MATH/TRAF domain profile. 2 125 28.649891 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K00276 (primary-amine oxidase [EC:1.4.3.21])
Pathway:
ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide) R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide) R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide) R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia) R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide) R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G42460.1 TRAF-like family protein. 0
RefSeq XP_018513039.2 uncharacterized protein LOC103860057 [Brassica rapa] 0
Swiss-Prot F4IN32 MATH domain and coiled-coil domain-containing protein At2g42460 OS=Arabidopsis thaliana OX=3702 GN=At2g42460 PE=2 SV=1 0
TrEMBL A0A8X7WM15 Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003449 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000020776, gene:ENSEOMG00000042009
Anacardiaceae Pistacia vera 2 pistato.v30053150, pistato.v30053760
Asparagaceae Asparagus officinalis 3 AsparagusV1_04.1844.V1.1, AsparagusV1_05.3047.V1.1 ...
AsparagusV1_09.696.V1.1
Brassicaceae Arabidopsis thaliana 38 AT1G31370.1, AT1G31380.1, AT1G31390.1, AT1G31400.1 ...
AT2G01790.1, AT2G05400.1, AT2G05410.1, AT2G05420.1, AT2G05430.1, AT2G42460.1, AT2G42470.1, AT2G42480.1, AT3G27040.1, AT3G29580.1, AT3G44790.1, AT3G44800.1, AT3G44805.1, AT3G58200.1, AT3G58210.1, AT3G58220.2, AT3G58230.1, AT3G58240.1, AT3G58250.1, AT3G58260.1, AT3G58270.1, AT3G58280.1, AT3G58290.1, AT3G58320.1, AT3G58330.1, AT3G58340.1, AT3G58350.1, AT3G58360.1, AT3G58370.1, AT3G58380.1, AT3G58400.1, AT3G58410.1, AT3G58430.1, AT3G58440.1
Brassicaceae Eutrema salsugineum 38 Thhalv10005920m.g.v1.0, Thhalv10006412m.g.v1.0 ...
Thhalv10006427m.g.v1.0, Thhalv10006437m.g.v1.0, Thhalv10006449m.g.v1.0, Thhalv10006467m.g.v1.0, Thhalv10006470m.g.v1.0, Thhalv10006486m.g.v1.0, Thhalv10008254m.g.v1.0, Thhalv10010958m.g.v1.0, Thhalv10011795m.g.v1.0, Thhalv10011971m.g.v1.0, Thhalv10011981m.g.v1.0, Thhalv10011998m.g.v1.0, Thhalv10012015m.g.v1.0, Thhalv10012031m.g.v1.0, Thhalv10012069m.g.v1.0, Thhalv10012071m.g.v1.0, Thhalv10012142m.g.v1.0, Thhalv10012179m.g.v1.0, Thhalv10016883m.g.v1.0, Thhalv10017071m.g.v1.0, Thhalv10017566m.g.v1.0, Thhalv10023572m.g.v1.0, Thhalv10023616m.g.v1.0, Thhalv10023897m.g.v1.0, Thhalv10023954m.g.v1.0, Thhalv10023996m.g.v1.0, Thhalv10024005m.g.v1.0, Thhalv10024153m.g.v1.0, Thhalv10026867m.g.v1.0, Thhalv10028053m.g.v1.0, Thhalv10028058m.g.v1.0, Thhalv10028109m.g.v1.0, Thhalv10028307m.g.v1.0, Thhalv10028318m.g.v1.0, Thhalv10029184m.g.v1.0, Thhalv10029219m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g34680.v2.2, Sp2g04170.v2.2, Sp2g04180.v2.2 ...
Sp4g24600.v2.2, Sp4g24610.v2.2, Sp5g04440.v2.2, Sp5g04450.v2.2, Sp5g04453.v2.2, Sp5g04457.v2.2, Sp5g04460.v2.2, Sp5g04480.v2.2, Sp5g04500.v2.2, Sp5g04510.v2.2, Sp5g21580.v2.2, Sp6g09200.v2.2, Sp6g09210.v2.2, Sp7g05400.v2.2, SpUn0053_0040.v2.2
Brassicaceae Brassica nigra 59 BniB01g003420.2N, BniB01g003430.2N, BniB01g003440.2N ...
BniB01g003450.2N, BniB01g025850.2N, BniB02g000230.2N, BniB02g001350.2N, BniB02g040450.2N, BniB02g049390.2N, BniB02g051720.2N, BniB03g001240.2N, BniB03g010160.2N, BniB03g011950.2N, BniB03g051100.2N, BniB03g052390.2N, BniB03g055960.2N, BniB04g020230.2N, BniB04g020250.2N, BniB04g020290.2N, BniB04g020300.2N, BniB04g020330.2N, BniB06g001540.2N, BniB06g054900.2N, BniB06g054910.2N, BniB06g054920.2N, BniB06g054930.2N, BniB06g054940.2N, BniB06g054960.2N, BniB06g054970.2N, BniB06g054980.2N, BniB06g054990.2N, BniB06g055000.2N, BniB06g055010.2N, BniB06g055020.2N, BniB06g055030.2N, BniB06g055040.2N, BniB06g055050.2N, BniB06g055060.2N, BniB06g055080.2N, BniB06g055090.2N, BniB06g055100.2N, BniB06g055120.2N, BniB06g055130.2N, BniB06g055140.2N, BniB06g055150.2N, BniB06g063480.2N, BniB06g063490.2N, BniB06g063500.2N, BniB06g063510.2N, BniB06g063530.2N, BniB06g063540.2N, BniB07g008670.2N, BniB07g045970.2N, BniB07g046280.2N, BniB07g046490.2N, BniB08g027490.2N, BniB08g072890.2N, BniB08g072950.2N, BniB08g073000.2N
Casuarinaceae Casuarina glauca 1 Cgl05G1118
Plantaginaceae Plantago ovata 1 Pov_00021253
Poaceae Zoysia japonica 1 nbis-gene-36802
Salicaceae Populus euphratica 1 populus_peu12364
Solanaceae Solanum pennellii 1 gene-LOC107019779
Zosteraceae Zostera marina 6 Zosma01g13790.v3.1, Zosma02g07570.v3.1, Zosma03g09470.v3.1 ...
Zosma03g10120.v3.1, Zosma05g15530.v3.1, Zosma05g17230.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.