Basic Information
Locus ID:
BniB08g026760.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 13965228 | 13968056 | + | BniB08g026760.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 63,772.70 Da | 47.67 | 84.36 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 117 | 379 | 4.57045E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 118 | 380 | 3.7E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 408 | 562 | 5.51E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 115 | 434 | 2.16E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 399 | 562 | 1.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 394 | 4.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 204 | 3.7E-23 | - |
| SMART | SM00220 | serkin_6 | 118 | 380 | 1.2E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 118 | 380 | 49.700104 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 124 | 150 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 242 | 254 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_013622126.1 | PREDICTED: CDPK-related kinase 1-like [Brassica oleracea var. oleracea] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WJW8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology