Basic Information
Locus ID:
BniB08g024690.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
pect1 pect1 (phosphorylethanolamine cytidylyltransferase 1)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 12635633 | 12638036 | + | BniB08g024690.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 40,239.17 Da | 43.68 | 82.53 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02173 | ECT | 191 | 343 | 4.0325E-84 | - |
| CDD | cd02174 | CCT | 1 | 147 | 1.42967E-78 | IPR041723 |
| Pfam | PF01467 | Cytidylyltransferase-like | 2 | 128 | 2.7E-26 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 196 | 327 | 3.5E-16 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 193 | 328 | 3.18E-24 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 2 | 131 | 4.74E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 162 | 357 | 5.1E-57 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 1 | 159 | 1.6E-52 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 2 | 63 | 8.4E-19 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 194 | 261 | 1.5E-17 | IPR004821 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_018472579.1 | PREDICTED: ethanolamine-phosphate cytidylyltransferase-like [Raphanus sativus] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MKB0 | ethanolamine-phosphate cytidylyltransferase OS=Raphanus sativus OX=3726 GN=LOC108843918 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology