Basic Information
Locus ID:
BniB08g024650.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 12609990 | 12611254 | + | BniB08g024650.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 36,459.78 Da | 33.71 | 94.08 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 311 | 6.9E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 314 | 2.83E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 105 | 5.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 318 | 4.5E-68 | - |
| SMART | SM00220 | serkin_6 | 4 | 311 | 8.3E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 311 | 43.947567 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.2 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_018473145.1 | PREDICTED: cyclin-dependent kinase B1-2 [Raphanus sativus] | 0 |
| Q2V419 | Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana OX=3702 GN=CDKB1-2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WLK5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003671 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology