halophFGD

Basic Information

Locus ID: BniB08g023130.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: F-Box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B8	11590174	11590793	+	BniB08g023130.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.00	20,015.49 Da	44.75	68.83	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14299	Phloem protein 2	1	157	2.8E-33	IPR025886

Best hit

Source	Best Hit ID	Description
TAIR	AT3G53000.1	phloem protein 2-A15.
RefSeq	XP_018473159.1	PREDICTED: F-box protein PP2-A15-like [Raphanus sativus]
Swiss-Prot	Q9LF92	F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1
TrEMBL	A0A8X7WKQ9	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003823 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10159, jg2325, jg23425, jg26853, jg29657, jg31987, jg37155 ... jg4841, jg7598
Aizoaceae	Mesembryanthemum crystallinum	3	gene_1398, gene_14790, gene_3186
Amaranthaceae	Atriplex hortensis	6	Ah003776, Ah009148, Ah016862, Ah018956, Ah023080, Ah030806
Amaranthaceae	Beta vulgaris	2	BVRB_5g101050, BVRB_7g160710
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg15524, Sbi_jg23708, Sbi_jg27493, Sbi_jg33232 ... Sbi_jg4420, Sbi_jg49335, Sbi_jg7549
Amaranthaceae	Salicornia europaea	4	Seu_jg12488, Seu_jg26792, Seu_jg5849, Seu_jg7946
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00000370, GOSA_00001269, GOSA_00005652, GOSA_00005653 ... GOSA_00006579
Amaranthaceae	Suaeda glauca	7	Sgl02042, Sgl07196, Sgl11165, Sgl51901, Sgl57194, Sgl71364 ... Sgl74957
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000001746, gene:ENSEOMG00000006543 ... gene:ENSEOMG00000006656, gene:ENSEOMG00000015627, gene:ENSEOMG00000021200, gene:ENSEOMG00000024442, gene:ENSEOMG00000031125, gene:ENSEOMG00000035630, gene:ENSEOMG00000037714, gene:ENSEOMG00000040134, gene:ENSEOMG00000045808, gene:ENSEOMG00000045846
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0004960, CQ.Regalona.r1.2BG0024250 ... CQ.Regalona.r1.3AG0002380, CQ.Regalona.r1.3BG0002530, CQ.Regalona.r1.5AG0007730, CQ.Regalona.r1.5BG0008500, CQ.Regalona.r1.7AG0019380, CQ.Regalona.r1.7BG0021970
Anacardiaceae	Pistacia vera	4	pistato.v30003790, pistato.v30143640, pistato.v30182320 ... pistato.v30274430
Apiaceae	Apium graveolens	5	Ag10G02006, Ag2G01979, Ag5G01100, Ag6G01805, Ag9G02837
Arecaceae	Cocos nucifera	3	COCNU_08G006340, COCNU_08G006350, COCNU_09G001440
Arecaceae	Phoenix dactylifera	5	gene-LOC103698736, gene-LOC103711142, gene-LOC103715069 ... gene-LOC103720766, gene-LOC120109120
Asparagaceae	Asparagus officinalis	3	AsparagusV1_04.1777.V1.1, AsparagusV1_04.3065.V1.1 ... AsparagusV1_08.387.V1.1
Asteraceae	Flaveria trinervia	10	Ftri14G03519, Ftri15G10047, Ftri16G00330, Ftri16G26758 ... Ftri2G22584, Ftri3G03509, Ftri5G12000, Ftri6G06780, Ftri6G28424, Ftri7G19720
Brassicaceae	Arabidopsis thaliana	5	AT1G12710.1, AT1G63090.1, AT3G53000.1, AT3G61060.2 ... AT5G52120.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10006134m.g.v1.0, Thhalv10008388m.g.v1.0 ... Thhalv10010582m.g.v1.0, Thhalv10014258m.g.v1.0, Thhalv10023623m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp1g11290.v2.2, Sp2g01500.v2.2, Sp4g18880.v2.2 ... Sp5g02300.v2.2, Sp5g09320.v2.2, SpUn0060_0060.v2.2
Brassicaceae	Brassica nigra	8	BniB02g058540.2N, BniB04g021870.2N, BniB04g027420.2N ... BniB06g062220.2N, BniB08g017450.2N, BniB08g023130.2N, BniB08g023190.2N, BniB08g067390.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq02G1517, Ceq02G2088, Ceq03G0455, Ceq05G0623
Casuarinaceae	Casuarina glauca	4	Cgl02G1571, Cgl02G2161, Cgl03G0558, Cgl05G0641
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno03g04280, gene.Cymno10g10580, gene.Cymno12g04330 ... gene.Cymno16g05550
Dunaliellaceae	Dunaliella salina	3	Dusal.0088s00023.v1.0, Dusal.0185s00020.v1.0 ... Dusal.0457s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate01g05100, gene.Thate02g12160, gene.Thate08g18170
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-6124
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.1574, evm.TU.LG01.2157, evm.TU.LG04.933 ... evm.TU.LG10.1344
Plantaginaceae	Plantago ovata	3	Pov_00003113, Pov_00004955, Pov_00016748
Plumbaginaceae	Limonium bicolor	6	Lb1G07866, Lb1G07871, Lb2G10769, Lb2G10967, Lb2G14104 ... Lb7G34025
Poaceae	Echinochloa crus-galli	14	AH01.5078, AH03.2669, AH07.2985, AH09.1982, BH01.3499 ... BH01.5215, BH03.2813, BH07.2809, BH09.2143, CH03.3015, CH07.2885, CH09.2287, CH09.281, Contig786.27
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_2AG0114270, gene-QOZ80_2AG0140660 ... gene-QOZ80_2BG0168070, gene-QOZ80_2BG0196320, gene-QOZ80_3AG0231090, gene-QOZ80_3BG0296730, gene-QOZ80_4AG0306920, gene-QOZ80_4BG0337940, gene-QOZ80_6AG0528970, gene-QOZ80_6BG0482980
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0051310.1, HORVU.MOREX.r3.2HG0187120.1 ... HORVU.MOREX.r3.4HG0413770.1, HORVU.MOREX.r3.5HG0497800.1, HORVU.MOREX.r3.6HG0603470.1
Poaceae	Lolium multiflorum	5	gene-QYE76_006768, gene-QYE76_007846, gene-QYE76_012177 ... gene-QYE76_024364, gene-QYE76_071371
Poaceae	Oryza coarctata	9	Oco04G018790, Oco05G000980, Oco07G013540, Oco08G013030 ... Oco17G009840, Oco18G001410, Oco18G009860, Oco19G008420, Oco20G008260
Poaceae	Oryza sativa	6	LOC_Os02g13160.1, LOC_Os02g45320.1, LOC_Os03g02550.1 ... LOC_Os04g48270.3, LOC_Os09g35680.1, LOC_Os10g37830.1
Poaceae	Paspalum vaginatum	5	gene-BS78_01G308800, gene-BS78_01G506100 ... gene-BS78_02G248100, gene-BS78_04G241200, gene-BS78_06G204800
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0100701, Pt_Chr0100791, Pt_Chr0203708, Pt_Chr0503027 ... Pt_Chr0503034, Pt_Chr0701197
Poaceae	Sporobolus alterniflorus	13	Chr04G006360, Chr06G005210, Chr06G029160, Chr07G005250 ... Chr09G003140, Chr09G023610, Chr10G013680, Chr11G008660, Chr13G021730, Chr15G006790, Chr15G020370, Chr23G006200, Chr25G005130
Poaceae	Thinopyrum elongatum	5	Tel1E01G325600, Tel2E01G690700, Tel4E01G585400 ... Tel5E01G500700, Tel6E01G477200
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG028540, gene_TRIDC1BG032930 ... gene_TRIDC2AG057850, gene_TRIDC2BG060750, gene_TRIDC4BG059550, gene_TRIDC5AG046450, gene_TRIDC5AG074530, gene_TRIDC5BG050250, gene_TRIDC6AG039420, gene_TRIDC6BG046250
Poaceae	Triticum aestivum	15	TraesCS1A02G188700.1, TraesCS1B02G196400.1 ... TraesCS1D02G187700.1, TraesCS2A02G400100.1, TraesCS2B02G418200.2, TraesCS2D02G397700.1, TraesCS4B02G356300.1, TraesCS4D02G350000.1, TraesCS5A02G312700.1, TraesCS5A02G525700.1, TraesCS5B02G313700.1, TraesCS5D02G319500.1, TraesCS6A02G256100.1, TraesCS6B02G269300.1, TraesCS6D02G237300.1
Poaceae	Zea mays	11	Zm00001eb001120_P001, Zm00001eb021380_P001 ... Zm00001eb073610_P001, Zm00001eb187160_P001, Zm00001eb239060_P001, Zm00001eb248010_P001, Zm00001eb266640_P001, Zm00001eb319000_P001, Zm00001eb324910_P001, Zm00001eb413460_P001, Zm00001eb428650_P001
Poaceae	Zoysia japonica	9	nbis-gene-22284, nbis-gene-22601, nbis-gene-34440 ... nbis-gene-35353, nbis-gene-36128, nbis-gene-4732, nbis-gene-49632, nbis-gene-7136, nbis-gene-9172
Poaceae	Zoysia macrostachya	7	Zma_g12787, Zma_g14116, Zma_g15545, Zma_g16863, Zma_g20267 ... Zma_g30050, Zma_g4575
Portulacaceae	Portulaca oleracea	9	evm.TU.LG03.2284, evm.TU.LG04.2345, evm.TU.LG04.3436 ... evm.TU.LG10.297, evm.TU.LG11.1595, evm.TU.LG16.151, evm.TU.LG17.1332, evm.TU.LG17.296, evm.TU.LG19.950
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g10480, gene.Posoc06g11780, gene.Posoc09g02650
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_11_RagTag.1347, evm.TU.Scaffold_2_RagTag.952 ... evm.TU.Scaffold_14_RagTag.233, evm.TU.Scaffold_16_RagTag.221, evm.TU.Scaffold_9_RagTag.397
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-18146, nbisL1-mrna-21739, nbisL1-mrna-22465 ... nbisL1-mrna-4256
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-15983, nbisL1-mrna-18852, nbisL1-mrna-4189 ... nbisL1-mrna-6252
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10055, nbisL1-mrna-12919, nbisL1-mrna-20288 ... nbisL1-mrna-7110, nbisL1-mrna-8477
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000003l.299, evm.TU.utg000007l.231 ... evm.TU.utg000009l.926, evm.TU.utg000010l.347, evm.TU.utg000022l.358
Rhizophoraceae	Kandelia obovata	5	Maker00004949, Maker00008988, Maker00009767, Maker00014453 ... Maker00018712
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-1055, nbisL1-mrna-12585, nbisL1-mrna-16073 ... nbisL1-mrna-3501, nbisL1-mrna-6886
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-10849, nbisL1-mrna-12738, nbisL1-mrna-20620 ... nbisL1-mrna-5788, nbisL1-mrna-6647
Salicaceae	Populus euphratica	7	populus_peu03510, populus_peu11599, populus_peu27784 ... populus_peu29236, populus_peu30597, populus_peu31712, populus_peu34343
Solanaceae	Lycium barbarum	8	gene-LOC132603855, gene-LOC132606968, gene-LOC132607153 ... gene-LOC132609879, gene-LOC132629929, gene-LOC132631843, gene-LOC132634969, gene-LOC132645672
Solanaceae	Solanum chilense	8	SOLCI000086300, SOLCI001285500, SOLCI001683800 ... SOLCI001696900, SOLCI003410900, SOLCI003915500, SOLCI004644500, SOLCI005170800
Solanaceae	Solanum pennellii	8	gene-LOC107001939, gene-LOC107002714, gene-LOC107002822 ... gene-LOC107007554, gene-LOC107013964, gene-LOC107026696, gene-LOC107029526, gene-LOC107032397
Tamaricaceae	Reaumuria soongarica	3	STRG.1049_chr01_+, STRG.24154_chr05_-, STRG.29156_chr11_+
Tamaricaceae	Tamarix chinensis	4	TC00000030, TC01G4527, TC03G2486, TC09G2162
Zosteraceae	Zostera marina	4	Zosma01g07570.v3.1, Zosma01g35950.v3.1, Zosma05g33430.v3.1 ... Zosma06g12000.v3.1