Basic Information
Locus ID:
BniB08g022550.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 11197841 | 11199875 | - | BniB08g022550.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 48,185.77 Da | 53.19 | 56.61 | -1.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 231 | 314 | 7.5E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 281 | - | - |
| Coils | Coil | Coil | 367 | 388 | - | - |
| Coils | Coil | Coil | 246 | 273 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_013734325.2 | protein WVD2-like 4 [Brassica napus] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8BFM6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_003873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology