Basic Information
Locus ID:
BniB08g015940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 7332026 | 7333258 | + | BniB08g015940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 41,385.35 Da | 41.30 | 91.82 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 111 | 339 | 9.7E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 106 | 348 | 8.9E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 360 | 4.5E-34 | - |
| SMART | SM00220 | serkin_6 | 81 | 350 | 1.7E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 349 | 17.050564 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013623420.1 | PREDICTED: non-functional pseudokinase ZED1-like [Brassica oleracea var. oleracea] | 0 |
| Q9SVY5 | Serine/threonine-protein kinase ZRK1 OS=Arabidopsis thaliana OX=3702 GN=ZRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S9P1P1 | Protein kinase domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q69_00001250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology