Basic Information
Locus ID:
BniB08g012860.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 5932760 | 5934452 | + | BniB08g012860.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 57,700.44 Da | 50.13 | 76.75 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 202 | 451 | 4.66376E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 202 | 451 | 4.5E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 187 | 451 | 5.26E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 278 | 3.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 279 | 482 | 7.0E-61 | - |
| SMART | SM00220 | serkin_6 | 195 | 451 | 2.2E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 195 | 455 | 42.279755 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 319 | 331 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 422 | 444 | 3.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 313 | 331 | 3.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 378 | 400 | 3.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 359 | 369 | 3.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 275 | 288 | 3.3E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 123 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013732454.2 | serine/threonine/tyrosine-protein kinase HT1 [Brassica napus] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816VHG8 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A03P11960.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology