Basic Information
Locus ID:
BniB08g009570.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 4473646 | 4476127 | - | BniB08g009570.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 60,183.33 Da | 45.34 | 81.81 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 206 | 480 | 5.3E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 180 | 480 | 4.43E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 508 | 3.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 173 | 277 | 1.6E-24 | - |
| SMART | SM00220 | serkin_6 | 203 | 479 | 1.5E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 203 | 487 | 34.675663 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 334 | 346 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 209 | 232 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018475374.1 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Raphanus sativus] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MT80 | receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Raphanus sativus OX=3726 GN=LOC108846667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology