Basic Information
Locus ID:
BniB08g009290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 4324126 | 4326115 | + | BniB08g009290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 54,658.30 Da | 41.84 | 85.84 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 178 | 444 | 6.44439E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 173 | 439 | 2.0E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 446 | 1.33E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 248 | 461 | 1.9E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 153 | 247 | 4.8E-33 | - |
| SMART | SM00220 | serkin_6 | 172 | 443 | 5.6E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 172 | 449 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 294 | 306 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 178 | 201 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 138 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018476012.1 | PREDICTED: probable receptor-like protein kinase At5g18500 [Raphanus sativus] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7WNY3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_004901 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology