Basic Information
Locus ID:
BniB08g008640.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 4089656 | 4090877 | - | BniB08g008640.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 22,456.09 Da | 33.45 | 89.90 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17370.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_033143053.1 | uncharacterized protein LOC103856247 [Brassica rapa] | 0 |
| TrEMBL | A0A8S9PYD9 | WD_REPEATS_REGION domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q69_00018947 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20939 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25250 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027100 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g132700 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg13446, Sbi_jg52421 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg9429 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00013432 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl33764, Sgl39076 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001895, gene:ENSEOMG00000002384 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0022100, CQ.Regalona.r1.6BG0023260 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30221000 |
| Apiaceae | Apium graveolens | 8 | Ag9G02454, Ag9G02455, Ag9G02535, Ag9G02536, Ag9G02542 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103696415 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.3821.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G17383 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G17370.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015915m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g26850.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB05g046480.2N, BniB07g020860.2N, BniB08g008640.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0021 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0043 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno18g04480 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g05400 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.299 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00012890 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G24847 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.43, BH03.48, CH03.68 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0552260, gene-QOZ80_7BG0583290 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0156710.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_043178 |
| Poaceae | Oryza coarctata | 1 | Oco13G000330 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g01730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G004000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0303351, Pt_Chr0303411 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G002610, Chr28G000280 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G478000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG037110, gene_TRIDC2BG040680 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G261800.1, TraesCS2B02G280400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb298410_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52674 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2889, evm.TU.LG23.1084 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g03250 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_10_RagTag.1045 ... |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13452 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5338 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9269 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000004l.294 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003865 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3650 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7664 |
| Salicaceae | Populus euphratica | 1 | populus_peu03837 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621424 |
| Solanaceae | Solanum chilense | 1 | SOLCI003708700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031141 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10715 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0966 |
| Zosteraceae | Zostera marina | 1 | Zosma02g05430.v3.1 |