Basic Information
Locus ID:
BniB08g007640.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 3667958 | 3670603 | + | BniB08g007640.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 70,191.91 Da | 33.65 | 98.99 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 311 | 578 | 2.7E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 187 | 2.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 8.0E-14 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 290 | 582 | 6.26E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 201 | 1.23E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 218 | 5.0E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 386 | 1.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 600 | 2.5E-60 | - |
| SMART | SM00220 | serkin_6 | 310 | 581 | 9.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 310 | 591 | 34.025497 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 316 | 338 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 429 | 441 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_018476919.1 | PREDICTED: protein NSP-INTERACTING KINASE 1 isoform X1 [Raphanus sativus] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MXR2 | protein NSP-INTERACTING KINASE 1 isoform X1 OS=Raphanus sativus OX=3726 GN=LOC108848015 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology