Basic Information
Locus ID:
BniB08g007160.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 3476468 | 3478497 | + | BniB08g007160.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 55,305.90 Da | 40.49 | 68.52 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 153 | 430 | 1.75297E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 151 | 427 | 1.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 444 | 6.42E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 131 | 232 | 2.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 448 | 7.1E-64 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 147 | 433 | 39.580158 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 276 | 288 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 153 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013628691.1 | PREDICTED: probable receptor-like protein kinase At5g15080 [Brassica oleracea var. oleracea] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3B173 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106334856 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology