Basic Information
Locus ID:
BniB08g005150.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 2509600 | 2513254 | - | BniB08g005150.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 54,772.96 Da | 40.61 | 96.26 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 69 | 326 | 9.9E-26 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 365 | 470 | 3.3E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 79 | 335 | 8.8E-45 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 476 | 7.28E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 338 | 481 | 4.0E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 137 | 6.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 337 | 4.8E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 334 | 23.099915 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018487320.1 | PREDICTED: putative inactive serine/threonine-protein kinase At5g11400 [Raphanus sativus] | 0 |
| Q9LFL6 | Inactive serine/threonine-protein kinase BKN2 OS=Arabidopsis thaliana OX=3702 GN=BKN2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WSD2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_005485 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G11400.2, AT5G11410.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014040m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g32190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g005150.2N |