Basic Information
Locus ID:
BniB08g000960.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
lectin protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 458420 | 460570 | - | BniB08g000960.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 76,760.12 Da | 39.63 | 86.44 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 381 | 652 | 3.18141E-92 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 52 | 260 | 8.3014E-84 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 46 | 268 | 1.6E-58 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 376 | 580 | 2.1E-47 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 36 | 266 | 7.0E-61 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 652 | 9.7E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 33 | 271 | 1.0E-67 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 450 | 4.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 658 | 5.7E-61 | - |
| SMART | SM00220 | serkin_6 | 375 | 653 | 8.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 375 | 661 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 494 | 506 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 381 | 404 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 147 | 153 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 286 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_013725024.2 | L-type lectin-domain containing receptor kinase VIII.2 [Brassica napus] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | M4CNF4 | non-specific serine/threonine protein kinase OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology