Basic Information
Locus ID:
BniB08g000050.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B8 | 18066 | 19334 | + | BniB08g000050.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 32,456.63 Da | 36.33 | 88.24 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 96 | 252 | 5.7E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 253 | 1.24E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 76 | 8.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 77 | 261 | 4.5E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 267 | 25.403757 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 47 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.4 | - | 0 |
| RefSeq | XP_018474360.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g37450 [Raphanus sativus] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MPG0 | probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Raphanus sativus OX=3726 GN=LOC108845697 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology