Basic Information
Locus ID:
BniB07g062550.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
RPL18
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 58054759 | 58055584 | + | BniB07g062550.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.97 | 20,820.31 Da | 38.68 | 88.06 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 1 | 186 | 8.1E-92 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 19 | 138 | 9.29E-27 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 186 | 1.2E-95 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 186 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_013619567.1 | PREDICTED: 60S ribosomal protein L18-2 [Brassica oleracea var. oleracea] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A398A7K2 | Ribosomal_L18e/L15P domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_A03704 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology