Basic Information
Locus ID:
BniB07g061520.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
MUB1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 57486427 | 57487287 | + | BniB07g061520.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 13,194.20 Da | 29.61 | 85.85 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 4.12227E-46 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 116 | 1.1E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 95 | 1.72E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 6.2E-40 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 5.8E-48 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 74 | 9.13399 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01050.1 | membrane-anchored ubiquitin-fold protein 1 precursor. | 0 |
| RefSeq | XP_018433827.1 | PREDICTED: membrane-anchored ubiquitin-fold protein 1-like [Raphanus sativus] | 0 |
| Q9MAB9 | Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana OX=3702 GN=MUB1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JDX2 | Membrane-anchored ubiquitin-fold protein OS=Raphanus sativus OX=3726 GN=LOC108806256 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology