halophFGD

Basic Information

Locus ID: BniB07g059420.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: BEST Arabidopsis thaliana protein match is HRB1 (HYPERSENSITIVE TO RED AND BLUE)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B7	56486981	56488488	-	BniB07g059420.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.59	24,486.38 Da	61.10	75.59	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14571	Stress-induced protein Di19, C-terminal	117	213	3.0E-27	IPR027935
Pfam	PF05605	Drought induced 19 protein (Di19), zinc-binding	42	94	3.4E-19	IPR008598

KEGG Pathway

KO Term:

K22376 (E3 ubiquitin-protein ligase KCMF1 [EC:2.3.2.27])

Best hit

Source	Best Hit ID	Description
TAIR	AT3G06760.1	Drought-responsive family protein.
RefSeq	XP_018433402.1	PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Raphanus sativus]
Swiss-Prot	Q8VXU6	Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1
TrEMBL	A0A8X7QN38	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068024 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg12381, jg1401, jg16061, jg26528, jg28261, jg29965, jg35145 ... jg38418
Aizoaceae	Mesembryanthemum crystallinum	3	gene_11957, gene_15928, gene_5266
Amaranthaceae	Atriplex hortensis	3	Ah005681, Ah019150, Ah029343
Amaranthaceae	Beta vulgaris	2	BVRB_3g048090, BVRB_4g076590
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17218, Sbi_jg37977, Sbi_jg6109, Sbi_jg61828
Amaranthaceae	Salicornia europaea	2	Seu_jg15729, Seu_jg477
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00006176, GOSA_00015400, GOSA_00024894, GOSA_00024895
Amaranthaceae	Suaeda glauca	8	Sgl00891, Sgl05845, Sgl05968, Sgl24415, Sgl29590, Sgl74044 ... Sgl77534, Sgl77743
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000000838, gene:ENSEOMG00000007675 ... gene:ENSEOMG00000011665, gene:ENSEOMG00000028269, gene:ENSEOMG00000032535, gene:ENSEOMG00000037882, gene:ENSEOMG00000038388, gene:ENSEOMG00000040662, gene:ENSEOMG00000043413, gene:ENSEOMG00000043901
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.3AG0001040, CQ.Regalona.r1.3BG0001100 ... CQ.Regalona.r1.4AG0007450, CQ.Regalona.r1.4BG0007710, CQ.Regalona.r1.7AG0012290, CQ.Regalona.r1.7BG0014410
Anacardiaceae	Pistacia vera	3	pistato.v30081950, pistato.v30082060, pistato.v30233680
Apiaceae	Apium graveolens	6	Ag1G01991, Ag5G02388, Ag6G02023, Ag7G00769, Ag8G00955 ... Ag9G01901
Arecaceae	Cocos nucifera	3	COCNU_01G001540, COCNU_12G002730, COCNU_16G004030
Arecaceae	Phoenix dactylifera	6	gene-LOC103711242, gene-LOC103712425, gene-LOC103712615 ... gene-LOC103720018, gene-LOC120109301, gene-LOC120109426
Asparagaceae	Asparagus officinalis	11	AsparagusV1_01.2621.V1.1, AsparagusV1_01.3332.V1.1 ... AsparagusV1_02.2162.V1.1, AsparagusV1_03.1656.V1.1, AsparagusV1_05.1492.V1.1, AsparagusV1_05.2181.V1.1, AsparagusV1_07.1342.V1.1, AsparagusV1_07.1343.V1.1, AsparagusV1_07.3138.V1.1, AsparagusV1_08.3191.V1.1, AsparagusV1_09.1412.V1.1
Asteraceae	Flaveria trinervia	6	Ftri14G08356, Ftri15G06716, Ftri15G21850, Ftri16G19672 ... Ftri3G05515, Ftri3G32261
Brassicaceae	Arabidopsis thaliana	7	AT1G02750.1, AT1G56280.1, AT3G05700.1, AT3G06760.2 ... AT4G02200.3, AT5G26990.1, AT5G49230.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10004901m.g.v1.0, Thhalv10004911m.g.v1.0 ... Thhalv10008730m.g.v1.0, Thhalv10021475m.g.v1.0, Thhalv10021933m.g.v1.0, Thhalv10023620m.g.v1.0, Thhalv10028950m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp1g01730.v2.2, Sp2g19610.v2.2, Sp2g21060.v2.2 ... Sp3g04580.v2.2, Sp3g05730.v2.2, Sp6g02100.v2.2
Brassicaceae	Brassica nigra	9	BniB01g056970.2N, BniB02g000300.2N, BniB02g060220.2N ... BniB02g078870.2N, BniB03g024450.2N, BniB03g038200.2N, BniB04g004620.2N, BniB07g037680.2N, BniB07g059420.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq06G1011, Ceq06G1136, Ceq09G1082
Casuarinaceae	Casuarina glauca	3	Cgl06G1042, Cgl06G1183, Cgl09G1173
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g17940, gene.Cymno03g02250
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g03260, gene.Thate07g09970
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-5098
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.2516, evm.TU.LG04.402, evm.TU.LG11.1241
Plantaginaceae	Plantago ovata	4	Pov_00007190, Pov_00026065, Pov_00036779, Pov_00039227
Plumbaginaceae	Limonium bicolor	2	Lb1G06599, Lb2G11759
Poaceae	Echinochloa crus-galli	8	AH05.2815, AH05.3720, BH01.2209, BH05.2931, BH05.3759 ... CH01.2301, CH05.2914, CH05.3954
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_5AG0393580
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0061330.1, HORVU.MOREX.r3.5HG0443980.1
Poaceae	Lolium multiflorum	1	gene-QYE76_001774
Poaceae	Oryza coarctata	4	Oco09G007420, Oco10G007650, Oco23G008200, Oco24G007840
Poaceae	Oryza sativa	2	LOC_Os05g28980.1, LOC_Os12g36900.1
Poaceae	Paspalum vaginatum	2	gene-BS78_08G099800, gene-BS78_09G112900
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0703825
Poaceae	Sporobolus alterniflorus	6	Chr01G022180, Chr06G017530, Chr12G015660, Chr18G006840 ... Chr19G009390, Chr22G010510
Poaceae	Thinopyrum elongatum	2	Tel1E01G381900, Tel5E01G177700
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG034200, gene_TRIDC1BG039640 ... gene_TRIDC5AG013870, gene_TRIDC5BG015930
Poaceae	Triticum aestivum	6	TraesCS1A02G227200.1, TraesCS1B02G241300.1 ... TraesCS1D02G228800.1, TraesCS5A02G090400.2, TraesCS5B02G096100.2, TraesCS5D02G102400.1
Poaceae	Zea mays	2	Zm00001eb285900_P003, Zm00001eb410020_P001
Poaceae	Zoysia japonica	4	nbis-gene-17816, nbis-gene-30311, nbis-gene-37164 ... nbis-gene-46433
Poaceae	Zoysia macrostachya	3	Zma_g25961, Zma_g26686, Zma_g27953
Portulacaceae	Portulaca oleracea	5	evm.TU.LG08.727, evm.TU.LG11.1371, evm.TU.LG18.1290 ... evm.TU.LG20.598, evm.TU.LG22.1334
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g07750
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_1_RagTag.82, evm.TU.Scaffold_2_RagTag.2087 ... evm.TU.Scaffold_2_RagTag.2088, evm.TU.Scaffold_3_RagTag.625, evm.TU.Scaffold_5_RagTag.823
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-11511, nbisL1-mrna-2900, nbisL1-mrna-8194
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-12860, nbisL1-mrna-15204, nbisL1-mrna-15858 ... nbisL1-mrna-568, nbisL1-mrna-7121
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-11459, nbisL1-mrna-13661, nbisL1-mrna-458 ... nbisL1-mrna-5167
Rhizophoraceae	Kandelia candel	7	evm.TU.utg000006l.196, evm.TU.utg000009l.36 ... evm.TU.utg000009l.37, evm.TU.utg000011l.320, evm.TU.utg000012l.57, evm.TU.utg000012l.58, evm.TU.utg000019l.838
Rhizophoraceae	Kandelia obovata	5	Maker00005309, Maker00006882, Maker00011234, Maker00012436 ... Maker00013809
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-10101, nbisL1-mrna-13001, nbisL1-mrna-13759 ... nbisL1-mrna-7900, nbisL1-mrna-7901
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-13065, nbisL1-mrna-16131, nbisL1-mrna-7455
Salicaceae	Populus euphratica	9	populus_peu08026, populus_peu08033, populus_peu13318 ... populus_peu15635, populus_peu22398, populus_peu22408, populus_peu27300, populus_peu31291, populus_peu31292
Solanaceae	Lycium barbarum	4	gene-LOC132598405, gene-LOC132604512, gene-LOC132608810 ... gene-LOC132626660
Solanaceae	Solanum chilense	3	SOLCI002719100, SOLCI005070800, SOLCI005285300
Solanaceae	Solanum pennellii	4	gene-LOC107005364, gene-LOC107007822, gene-LOC107009134 ... gene-LOC107031760
Tamaricaceae	Reaumuria soongarica	3	STRG.32666_chr09_+, STRG.7923_chr04_+, gene_7046
Tamaricaceae	Tamarix chinensis	3	TC01G0433, TC02G0898, TC05G1453
Zosteraceae	Zostera marina	1	Zosma04g25310.v3.1