Basic Information
Locus ID:
BniB07g058500.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 56094448 | 56095643 | + | BniB07g058500.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 10,553.35 Da | 37.45 | 109.69 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08850.1 | HEAT repeat ;WD domain, G-beta repeat protein protein. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. | 0 |
| TrEMBL | A0A8X7TLT3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_085464 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14720, jg3198 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14560 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031418 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_7g157690, BVRB_7g157970 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2242, Sbi_jg34265 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2513 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005961 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71025, Sgl74616 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000035490, gene:ENSEOMG00000039698 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.7AG0022190, CQ.Regalona.r1.7AG0022780 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30268250 |
| Apiaceae | Apium graveolens | 2 | Ag10G00972, Ag5G02810 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G004100, COCNU_12G006510 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708869, gene-LOC103714392 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.299.V1.1, AsparagusV1_07.1072.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G16525, Ftri9G05039 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G08850.1, AT5G01770.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10012449m.g.v1.0, Thhalv10019904m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g07250.v2.2, Sp6g41030.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g054320.2N, BniB01g055740.2N, BniB07g024560.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0928 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0946 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g14630 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0279s00012.v1.0, Dusal.0279s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g03290 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-11969, nbisL1-mrna-4303 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006958 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09603 |
| Poaceae | Echinochloa crus-galli | 8 | AH04.53, AH05.58, BH04.60, CH02.2102, CH02.2472, CH04.161 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0378880, gene-QOZ80_5BG0426010 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0464830.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_003616 |
| Poaceae | Oryza coarctata | 2 | Oco22G000290, Ocoptg000061lG000460 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g01872.1, LOC_Os12g01922.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G009700, gene-BS78_08G003000 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101003, Pt_Chr0702866, Pt_Chr0702885 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr07G022300, Chr17G007270, Chr19G011540, Chr27G004520 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G259600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG025000, gene_TRIDC5BG026250 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G149200.2, TraesCS5B02G147900.4 ... |
| Poaceae | Zea mays | 3 | Zm00001eb093980_P001, Zm00001eb195140_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-40095, nbis-gene-57149 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g17510, Zma_g24612, Zma_g25443 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.2126, evm.TU.LG07.915, evm.TU.LG14.418 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g33950, gene.Posoc01g33960 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1891 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5656 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-1336, nbisL1-mrna-1337 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3638, nbisL1-mrna-3639 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000016l.744, evm.TU.utg000016l.745 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017315 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4909 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13825 |
| Salicaceae | Populus euphratica | 3 | populus_peu11492, populus_peu25305, populus_peu25329 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606757, gene-LOC132631363 |
| Solanaceae | Solanum chilense | 2 | SOLCI004127600, SOLCI004935400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107001588, gene-LOC107031079 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_5716, gene_7476 |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G2387, TC07G1044 |
| Zosteraceae | Zostera marina | 1 | Zosma01g19160.v3.1 |