Basic Information
Locus ID:
BniB07g056490.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 55239616 | 55242506 | + | BniB07g056490.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 61,140.93 Da | 52.07 | 79.78 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 25 | 277 | 3.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 298 | 1.54E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 103 | 3.5E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 288 | 2.1E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 282 | 35.763981 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 145 | 157 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 393 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12200.1 | NIMA-related kinase 7. Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_018440816.1 | PREDICTED: serine/threonine-protein kinase Nek7 [Raphanus sativus] | 0 |
| Q9LHI7 | Serine/threonine-protein kinase Nek7 OS=Arabidopsis thaliana OX=3702 GN=NEK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8B1X9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_021089 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology