Basic Information
Locus ID:
BniB07g056370.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 55205997 | 55207192 | - | BniB07g056370.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.33 | 21,845.90 Da | 46.72 | 72.92 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 165 | 201 | 3.03846E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 163 | 201 | 2.5E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 57 | 112 | 2.9E-22 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 163 | 200 | 2.5E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 63 | 116 | 2.9E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 57 | 113 | 5.0E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 54 | 119 | 17.978523 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 164 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_018436639.1 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 3 [Raphanus sativus] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JPC5 | nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Raphanus sativus OX=3726 GN=LOC108809015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology