Basic Information
Locus ID:
BniB07g054850.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 54461309 | 54465811 | + | BniB07g054850.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 85,065.16 Da | 42.65 | 88.02 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 3.9E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 422 | 636 | 1.8E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 167 | 9.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 766 | 1.23E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 232 | 3.95E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 248 | 1.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 500 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 502 | 778 | 2.6E-50 | - |
| SMART | SM00369 | LRR_typ_2 | 95 | 123 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 188 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 163 | 41.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 768 | 34.901806 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 143 | 165 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_013644110.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Brassica napus] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P5ZM50 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA01T03977Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology