Basic Information
Locus ID:
BniB07g053900.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 54060512 | 54062088 | - | BniB07g053900.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 38,581.45 Da | 43.05 | 80.21 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 41 | 303 | 1.4E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 303 | 2.87E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 319 | 3.4E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 115 | 2.6E-33 | - |
| PIRSF | PIRSF000654 | ILK | 8 | 320 | 9.4E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 320 | 30.067978 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 159 | 171 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 45 | 67 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 340 | - | - |
| Coils | Coil | Coil | 324 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009115182.1 | PTI1-like tyrosine-protein kinase At3g15890 [Brassica rapa] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VVU1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020897 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology