Basic Information
Locus ID:
BniB07g052480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
F-box associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 53396389 | 53397372 | - | BniB07g052480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 27,117.32 Da | 33.69 | 89.87 | -0.16 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17710.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_018438408.1 | PREDICTED: protein SUPPRESSOR OF NIM1 1-like [Raphanus sativus] | 0 |
| Q9LUM6 | F-box protein At3g17710 OS=Arabidopsis thaliana OX=3702 GN=At3g17710 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0JS69 | protein SUPPRESSOR OF NIM1 1-like OS=Raphanus sativus OX=3726 GN=LOC108810832 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 22 | AT1G12170.1, AT1G12190.1, AT1G32430.1, AT1G47390.1 ... |
| Brassicaceae | Eutrema salsugineum | 17 | Thhalv10002898m.g.v1.0, Thhalv10006465m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g27690.v2.2, Sp5g16370.v2.2 |
| Brassicaceae | Brassica nigra | 23 | BniB01g008560.2N, BniB01g010040.2N, BniB01g047060.2N ... |