Basic Information
Locus ID:
BniB07g052340.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ATP binding kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 53336049 | 53338084 | - | BniB07g052340.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 67,651.48 Da | 36.55 | 98.23 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 351 | 616 | 1.57914E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 80 | 126 | 1.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 348 | 613 | 8.4E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 1.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 619 | 4.98E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 208 | 1.74E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 624 | 1.9E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 257 | 6.6E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 419 | 6.2E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 345 | 618 | 32.795841 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 351 | 373 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17840.1 | receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. | 0 |
| RefSeq | XP_013725441.2 | probable inactive receptor kinase RLK902 [Brassica napus] | 0 |
| Q9LVI6 | Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VUD4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020811 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology