Basic Information
Locus ID:
BniB07g052330.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 53329300 | 53335117 | + | BniB07g052330.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 141,522.30 Da | 55.37 | 76.49 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 870 | 1154 | 4.05305E-168 | - |
| Pfam | PF00069 | Protein kinase domain | 864 | 1149 | 1.5E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 861 | 1191 | 2.83E-90 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 862 | 1178 | 1.5E-107 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 948 | 1167 | 1.5E-107 | - |
| SMART | SM00220 | serkin_6 | 864 | 1149 | 1.1E-103 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1150 | 1256 | 9.509697 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 864 | 1149 | 52.851986 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 983 | 995 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1214 | 1231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1201 | 1231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1022 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009113699.2 | probable serine/threonine protein kinase IREH1 [Brassica rapa] | 0 |
| F4J6F6 | Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VT89 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology