Basic Information
Locus ID:
BniB07g051450.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 52905595 | 52908673 | - | BniB07g051450.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 67,016.02 Da | 49.55 | 83.86 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 144 | 404 | 2.03075E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 145 | 405 | 8.0E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 435 | 587 | 2.67E-14 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 424 | 5.66E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 430 | 584 | 8.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 416 | 3.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 422 | 514 | 8.1E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 145 | 232 | 1.8E-21 | - |
| SMART | SM00220 | serkin_6 | 143 | 405 | 4.0E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 143 | 405 | 50.519875 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 267 | 279 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 149 | 175 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19100.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009145826.1 | CDPK-related kinase 2 [Brassica rapa] | 0 |
| Q9LJL9 | CDPK-related kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VT27 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology