Basic Information
Locus ID:
BniB07g050700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 52554289 | 52556479 | - | BniB07g050700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 75,860.18 Da | 37.97 | 88.58 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 376 | 642 | 6.4E-27 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 88 | 1.0E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 200 | 5.7E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 233 | 2.99E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 648 | 9.42E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 233 | 3.9E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 668 | 8.0E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 447 | 1.5E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 646 | 24.965603 | IPR000719 |
| Coils | Coil | Coil | 626 | 646 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009111239.1 | pollen receptor-like kinase 4 [Brassica rapa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816Y354 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A01P34580.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology