Basic Information
Locus ID:
BniB07g050020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitogen-activated protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 52184314 | 52185950 | - | BniB07g050020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 32,394.45 Da | 66.83 | 88.33 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 22 | 279 | 1.25378E-143 | - |
| Pfam | PF00069 | Protein kinase domain | 25 | 279 | 2.7E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 280 | 9.31E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 287 | 8.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 103 | 8.2E-26 | - |
| SMART | SM00220 | serkin_6 | 24 | 279 | 2.4E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 279 | 46.604759 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 53 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21220.1 | MAP kinase kinase 5. Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_018459587.1 | PREDICTED: mitogen-activated protein kinase kinase 5 [Raphanus sativus] | 0 |
| Q8RXG3 | Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MKK5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7VTZ2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020601 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology