Basic Information
Locus ID:
BniB07g048590.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 51294826 | 51297498 | - | BniB07g048590.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 64,130.49 Da | 45.87 | 70.88 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 122 | 489 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 126 | 425 | 7.7E-63 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 444 | 488 | 5.9E-7 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 121 | 467 | 1.12E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 208 | 273 | 9.2E-67 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 95 | 207 | 9.2E-67 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 318 | 445 | 3.1E-43 | - |
| SMART | SM00220 | serkin_6 | 124 | 425 | 1.7E-103 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 426 | 490 | 4.7E-4 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 426 | 498 | 13.435665 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 425 | 47.367992 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 153 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 243 | 255 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 30 | - | - |
| Coils | Coil | Coil | 80 | 117 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_006406047.1 | serine/threonine-protein kinase 38-like [Eutrema salsugineum] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VTK8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020453 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology