Basic Information
Locus ID:
BniB07g048200.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 51040714 | 51043634 | - | BniB07g048200.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 100,611.63 Da | 39.84 | 86.18 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 592 | 865 | 8.93328E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 590 | 860 | 4.2E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 9.0E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 146 | 2.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 323 | 361 | 0.33 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 561 | 868 | 8.92E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 433 | 6.29E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 549 | 663 | 4.9E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 664 | 888 | 2.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 320 | 2.4E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 441 | 7.9E-29 | IPR032675 |
| SMART | SM00220 | serkin_6 | 586 | 866 | 2.4E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 0.36 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 230.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 586 | 866 | 41.177303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 592 | 614 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 473 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_013606721.1 | PREDICTED: receptor-like kinase TMK4 [Brassica oleracea var. oleracea] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6FWX5 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC1T03940H PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology