Basic Information
Locus ID:
BniB07g046700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NIK3
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 50114723 | 50118266 | - | BniB07g046700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 70,229.28 Da | 39.28 | 94.99 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 304 | 575 | 2.8E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 158 | 3.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 2.9E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 192 | 6.12E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 580 | 3.42E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 9.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 595 | 1.6E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 3.8E-52 | IPR032675 |
| SMART | SM00220 | serkin_6 | 304 | 577 | 5.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 587 | 35.622639 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 427 | 439 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_013605946.1 | PREDICTED: protein NSP-INTERACTING KINASE 3 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8B0C2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020289 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology