Basic Information
Locus ID:
BniB07g043370.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 48364644 | 48366617 | + | BniB07g043370.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 36,937.66 Da | 43.83 | 73.57 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 63 | 330 | 2.6E-76 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 218 | 321 | 1.08E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 216 | 334 | 7.5E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 220 | 322 | 26.019646 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.1 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_006394001.1 | auxin-responsive protein IAA9 isoform X1 [Eutrema salsugineum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VT34 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_020023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology