Basic Information
Locus ID:
BniB07g038240.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 45633836 | 45637126 | + | BniB07g038240.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 60,345.82 Da | 35.48 | 106.77 | 0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 32 | 445 | 2.0E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 149 | 200 | 9.0E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 29 | 450 | 3.8E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 156 | 166 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 116 | 124 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 87 | 98 | 1.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 101 | 115 | 1.9E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_009111931.1 | sodium/hydrogen exchanger 1 [Brassica rapa] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7VRT1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019651 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology