Basic Information
Locus ID:
BniB07g037820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 45406405 | 45411106 | + | BniB07g037820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 83,704.98 Da | 50.14 | 68.96 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 478 | 724 | 4.06905E-133 | - |
| CDD | cd00130 | PAS | 109 | 210 | 2.70096E-16 | IPR000014 |
| Pfam | PF00989 | PAS fold | 101 | 210 | 3.2E-15 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 472 | 724 | 7.5E-71 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 102 | 210 | 1.92E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 724 | 2.29E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 550 | 751 | 2.6E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 549 | 1.6E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 108 | 213 | 9.0E-27 | - |
| SMART | SM00091 | pas_2 | 100 | 166 | 7.1E-10 | IPR000014 |
| SMART | SM00220 | serkin_6 | 472 | 732 | 7.4E-60 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 100 | 210 | 5.2E-17 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 98 | 164 | 15.704596 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 472 | 732 | 43.283268 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 585 | 603 | 3.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 695 | 717 | 3.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 632 | 642 | 3.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 546 | 559 | 3.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 651 | 673 | 3.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 308 | - | - |
| Coils | Coil | Coil | 6 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_022548003.1 | probable serine/threonine-protein kinase SIS8 [Brassica napus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VST0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019609 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology