Basic Information
Locus ID:
BniB07g037030.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 44910611 | 44912860 | - | BniB07g037030.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 82,593.81 Da | 44.08 | 86.38 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 446 | 729 | 1.14172E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 445 | 724 | 2.4E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 727 | 7.42E-74 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 38 | 290 | 1.48E-19 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 529 | 739 | 2.9E-56 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 141 | 299 | 7.9E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 528 | 2.5E-27 | - |
| SMART | SM00220 | serkin_6 | 440 | 731 | 2.0E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 731 | 37.21978 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 573 | 585 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 446 | 468 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_013697017.2 | serine/threonine-protein kinase-like protein CCR4 [Brassica napus] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VRY4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology