Basic Information
Locus ID:
BniB07g036340.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 44412806 | 44414684 | + | BniB07g036340.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 51,751.93 Da | 41.06 | 75.62 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 124 | 401 | 1.27788E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 122 | 398 | 5.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 398 | 3.28E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 94 | 203 | 1.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 204 | 417 | 2.8E-63 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 118 | 404 | 38.237431 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 124 | 156 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 454 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28690.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013618118.1 | PREDICTED: probable receptor-like protein kinase At5g15080 isoform X2 [Brassica oleracea var. oleracea] | 0 |
| F4J0D2 | Serine/threonine-protein kinase PBL36 OS=Arabidopsis thaliana OX=3702 GN=PBL36 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7VRW5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019478 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology