Basic Information
Locus ID:
BniB07g035700.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 44007368 | 44008085 | + | BniB07g035700.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 13,539.45 Da | 66.22 | 79.75 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 1.925E-44 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 118 | 3.0E-38 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 97 | 5.18E-26 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.4E-41 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 121 | 3.9E-50 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 74 | 9.6566 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_009111548.1 | membrane-anchored ubiquitin-fold protein 4 [Brassica rapa] | 0 |
| Q9LSD8 | Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8AZI9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019419 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology