Basic Information
Locus ID:
BniB07g034890.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
MUB1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 43613059 | 43613860 | + | BniB07g034890.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 12,270.14 Da | 26.57 | 85.18 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 88 | 9.18558E-39 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 110 | 8.5E-33 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 89 | 1.25E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 95 | 2.6E-32 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 112 | 1.2E-38 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 68 | 10.113883 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01050.1 | membrane-anchored ubiquitin-fold protein 1 precursor. | 0 |
| RefSeq | XP_009134637.1 | membrane-anchored ubiquitin-fold protein 1 [Brassica rapa] | 0 |
| Q9MAB9 | Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana OX=3702 GN=MUB1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A398A2P5 | Membrane-anchored ubiquitin-fold protein OS=Brassica campestris OX=3711 GN=BRARA_C02965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology