Basic Information
Locus ID:
BniB07g033050.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 42745972 | 42748317 | + | BniB07g033050.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 56,504.41 Da | 54.22 | 85.07 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 188 | 448 | 4.3E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 450 | 2.02E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 146 | 258 | 3.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 261 | 469 | 9.2E-59 | - |
| SMART | SM00220 | serkin_6 | 184 | 439 | 4.3E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 457 | 34.901806 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 190 | 212 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05140.2 | - | 0 |
| RefSeq | XP_018489610.1 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Raphanus sativus] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VR94 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019278 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology