Basic Information
Locus ID:
BniB07g032840.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
RPL18
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 42659916 | 42661556 | - | BniB07g032840.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.94 | 25,899.21 Da | 37.59 | 82.88 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 48 | 233 | 1.9E-91 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 66 | 185 | 1.7E-26 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 47 | 233 | 2.0E-96 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 233 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_013619567.1 | PREDICTED: 60S ribosomal protein L18-2 [Brassica oleracea var. oleracea] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A078HVC7 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC03g34340D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology