Basic Information
Locus ID:
BniB07g031780.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitogen-activated protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 41978411 | 41983849 | + | BniB07g031780.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 50,039.57 Da | 58.43 | 77.92 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 173 | 430 | 1.46002E-132 | - |
| CDD | cd12153 | F1-ATPase_epsilon | 41 | 85 | 4.61512E-20 | IPR006721 |
| Pfam | PF04627 | Mitochondrial ATP synthase epsilon chain | 41 | 88 | 1.2E-21 | IPR006721 |
| Pfam | PF00069 | Protein kinase domain | 176 | 430 | 2.8E-66 | IPR000719 |
| SUPERFAMILY | SSF48690 | Epsilon subunit of mitochondrial F1F0-ATP synthase | 39 | 85 | 3.14E-15 | IPR036742 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 173 | 454 | 1.48E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.1620.20 | ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial | 41 | 95 | 3.8E-23 | IPR036742 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 258 | 443 | 7.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 158 | 254 | 5.8E-26 | - |
| SMART | SM00220 | serkin_6 | 175 | 430 | 8.4E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 175 | 430 | 46.703697 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 181 | 204 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21220.1 | MAP kinase kinase 5. Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_018488229.1 | PREDICTED: mitogen-activated protein kinase kinase 5-like [Raphanus sativus] | 0 |
| Q8RXG3 | Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MKK5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8AX38 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology